BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006G09LP1|AL425590
(750 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1469 0.0
>3x_Contig1795
Length = 38452
Score = 1469 bits (739), Expect = 0.0
Identities = 741/743 (99%)
Strand = Plus / Plus
Query: 8 atggttgtaaagaatattcaagaactaatatcgacgaaaatgttaaacgggttggtgagg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atggttgtaaagaatattcaagaactaatatcgacgaaaatgttaaacgggttggtgagg 186
Query: 68 ttacttgccacgaatctaactttaagctcgatgaaaaamatcctctcgtacctagaagct 127
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 187 ttacttgccacgaatctaactttaagctcgatgaaaaaaatcctctcgtacctagaagct 246
Query: 128 ttagaacccttcgatacaaacccatccgcgttgcagcagttactactgactatgagatac 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttagaacccttcgatacaaacccatccgcgttgcagcagttactactgactatgagatac 306
Query: 188 aaattcgtgaccgaggagatagattcgtaccgcatcgtagacactacggcaaattccgtg 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aaattcgtgaccgaggagatagattcgtaccgcatcgtagacactacggcaaattccgtg 366
Query: 248 aaagagatgctaatcaaaaggaaaatcgaatgcgtcagagaatacgtttacggaaccatt 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaagagatgctaatcaaaaggaaaatcgaatgcgtcagagaatacgtttacggaaccatt 426
Query: 308 tctgttttcaactctctattcaaatcagaatcaaaattgatacacattgaactgttactc 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tctgttttcaactctctattcaaatcagaatcaaaattgatacacattgaactgttactc 486
Query: 368 gacgatactacatccaagactgcccatgacttcgaaacgtctcttgctctattgaaattt 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gacgatactacatccaagactgcccatgacttcgaaacgtctcttgctctattgaaattt 546
Query: 428 ataaacgagtgtaccaatttcctcatatcacaactcgaaacccataaatcacaccttacc 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ataaacgagtgtaccaatttcctcatatcacaactcgaaacccataaatcacaccttacc 606
Query: 488 gagtccgtctgtttacaactagtgtattgctctttcagactggcagacgcaaatcaaaac 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gagtccgtctgtttacaactagtgtattgctctttcagactggcagacgcaaatcaaaac 666
Query: 548 ttccatcacttgttcatgaataaactattagaatcaaacctatttacaaaagatgctctc 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ttccatcacttgttcatgaataaactattagaatcaaacctatttacaaaagatgctctc 726
Query: 608 acatcagcaatcacaaagagagtagaattggcaacgaggtattgagcagtgtggctactg 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 acatcagcaatcacaaagagagtagaattggcaacgaggtattgagcagtgtggctactg 786
Query: 668 tgtggatactgtgcttctaaacttgactatcgcgtataatttaatgtggaatagtggtct 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tgtggatactgtgcttctaaacttgactatcgcgtataatttaatgtggaatagtggtct 846
Query: 728 tgtaatttatatagaaaakcctc 750
|||||||||||||||||| ||||
Sbjct: 847 tgtaatttatatagaaaagcctc 869
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5020
Number of Sequences: 1807
Number of extensions: 5020
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 750
length of database: 10,358,551
effective HSP length: 16
effective length of query: 734
effective length of database: 10,329,639
effective search space: 7581955026
effective search space used: 7581955026
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)